Institute of Biochemistry, 8093 Zurich, Switzerland-
Abstract: The maintenance of DNA replication fork stability under conditions of DNA damage and at natural replication pause sites is essential for genome stability- Here, we describe a novel role for the F-box protein Dia2 in promoting genome stability in the budding yeast Saccharomyces cerevisiae- Like most other F-box proteins, Dia2 forms a Skp1-Cdc53-Cullin-F-box -SCF- E3 ubiquitin-ligase complex- Systematic analysis of genetic interactions between dia2Delta and approximately 4400 viable gene deletion mutants revealed synthetic lethal-synthetic sick interactions with a broad spectrum of DNA replication, recombination, checkpoint, and chromatin-remodeling pathways- dia2Delta strains exhibit constitutive activation of the checkpoint kinase Rad53 and elevated counts of endogenous DNA repair foci and are unable to overcome MMS-induced replicative stress- Notably, dia2Delta strains display a high rate of gross chromosomal rearrangements -GCRs- that involve the rDNA locus and an increase in extrachromosomal rDNA circle -ERC- formation, consistent with an observed enrichment of Dia2 in the nucleolus- These results suggest that Dia2 is essential for stable passage of replication forks through regions of damaged DNA and natural fragile regions, particularly the replication fork barrier -RFB- of rDNA repeat loci- We propose that the SCF-Dia2- ubiquitin ligase serves to modify or degrade protein substrates that would otherwise impede the replication fork in problematic regions of the genome-