Department of Chemistry and Chemical Biology, Rutgers-The State University of New Jersey, Piscataway, NJ 08854-8087, USA-
Abstract: Eukaryotic initiation factor 5A -eIF5A- is the only protein in nature that contains hypusine, an unusual amino acid formed post-translationally in two steps by deoxyhypusine synthase and deoxyhypusine hydroxylase- Genes encoding eIF5A or deoxyhypusine synthase are essential for cell survival and proliferation- To determine the physiological function of eIF5A, we have employed the tandem affinity purification -TAP- method and mass spectrometry to search for and identify the potential eIF5A-interacting proteins- The TAP-tag was fused in-frame to chromosomal TIF51A gene and eIF5A-TAP fusion protein expressed at its natural level was used as the bait to fish out its interacting partners- At salt concentrations of 150 mM, deoxyhypusine synthase was the only protein bound to eIF5A- As salt concentrations were lowered to 125 mM or less, eIF5A interacted with a set of proteins, which were identified as the components of the 80S ribosome complex- The eIF5A-ribosome interaction was sensitive to RNase and EDTA treatments, indicating the requirement of RNA and the joining of 40S and 60S ribosomal subunits for the interaction- Importantly, a single mutation of hypusine to arginine completely abolished the eIF5A-ribosome interaction- Sucrose gradient sedimentation analysis of log versus stationary phase cells and eIF3 mutant strain showed that the endogenous eIF5A co-sedimented with the actively translating 80S ribosomes and polyribosomes in an RNase- and EDTA-sensitive manner- Our study demonstrates for the first time that eIF5A interacts in a hypusine-dependent manner with a molecular complex rather than a single protein, suggesting that the essential function of eIF5A is mostly likely mediated through its interaction with the actively translating ribosomes-