| Name |
Aliases |
 |
Description |
| Evidence Code |
| Role |
Source [Interactions] |
|
|
 |
| CDC39 |
ROS1NOT1SMD6YCR093W |
 |
Component of the CCR4-NOT complex, which has multiple roles in regulating mRNA levels including regulation of transcription and destabilizing mRNAs by deadenylation; basal transcription factor
|
|
 |
 |
 |
| CCR4 |
FUN27NUT21YAL021C |
 |
Component of the CCR4-NOT transcriptional complex, which is involved in regulation of gene expression; component of the major cytoplasmic deadenylase, which is involved in mRNA poly(A) tail shortening
|
|
 |
 |
 |
| NOT5 |
YPR072W |
 |
Subunit of the CCR4-NOT complex, which is a global transcriptional regulator with roles in transcription initiation and elongation and in mRNA degradation
|
|
 |
 |
 |
| NOT3 |
YIL038C |
 |
Subunit of the CCR4-NOT complex, which is a global transcriptional regulator with roles in transcription initiation and elongation and in mRNA degradation
|
|
 |
 |
 |
| POP2 |
CAF1YNR052C |
 |
RNase of the DEDD superfamily, subunit of the Ccr4-Not complex that mediates 3' to 5' mRNA deadenylation
|
|
 |
 |
 |
| CAF40 |
YNL288W |
 |
Evolutionarily conserved subunit of the CCR4-NOT complex involved in controlling mRNA initiation, elongation and degradation; binds Cdc39p
|
|
 |
 |
 |
| CDC36 |
NOT2DNA19YDL165W |
 |
Component of the CCR4-NOT complex, which has multiple roles in regulating mRNA levels including regulation of transcription and destabilizing mRNAs by deadenylation; basal transcription factor
|
|
 |
 |
 |
| EGD1 |
YPL037C |
 |
Subunit beta1 of the nascent polypeptide-associated complex (NAC) involved in protein targeting, associated with cytoplasmic ribosomes; enhances DNA binding of the Gal4p activator; homolog of human BTF3b
|
|
 |
 |
 |
| UBC4 |
YBR082C |
 |
Ubiquitin-conjugating enzyme (E2), mediates degradation of short-lived and abnormal proteins; interacts with E3-CaM in ubiquitinating calmodulin; interacts with many SCF ubiquitin protein ligases; component of the cellular stress response
|
|
 |
 |
 |
| TAF1 |
TAF130TAF145YGR274C |
 |
TFIID subunit (145 kDa), involved in RNA polymerase II transcription initiation, has histone acetyltransferase activity, involved in promoter binding and G1/S progression
|
|
 |
 |
 |
| YKE2 |
GIM1PFD6YLR200W |
 |
Subunit of the heterohexameric Gim/prefoldin protein complex involved in the folding of alpha-tubulin, beta-tubulin, and actin
|
|
 |
 |
 |
| JSN1 |
PUF1YJR091C |
 |
Member of the Puf family of RNA-binding proteins, interacts with mRNAs encoding membrane-associated proteins; overexpression suppresses a tub2-150 mutation and causes increased sensitivity to benomyl in wild-type cells
|
|
 |
 |
 |
| JHD2 |
KDM5YJR119C |
 |
JmjC domain family histone demethylase specific for H3-K4 (lysine at position 4 of the histone H3 protein); removes methyl groups specifically added by Set1p methyltransferase
|
|
 |
 |
 |
| DHH1 |
YDL160C |
 |
Cytoplasmic DExD/H-box helicase, stimulates mRNA decapping, coordinates distinct steps in mRNA function and decay, interacts with both the decapping and deadenylase complexes, may have a role in mRNA export and translation
|
|
 |
 |
 |
| YOR302W |
YOR302W |
 |
CPA1 uORF , Arginine attenuator peptide, regulates translation of the CPA1 mRNA
|
|
 |
 |
 |
| GCN5 |
SWI9ADA4YGR252W |
 |
Histone acetyltransferase, acetylates N-terminal lysines on histones H2B and H3; catalytic subunit of the ADA and SAGA histone acetyltransferase complexes; founding member of the Gcn5p-related N-acetyltransferase superfamily
|
|
 |
 |
 |
| BUR2 |
CST4YLR226W |
 |
Cyclin for the Sgv1p (Bur1p) protein kinase; Sgv1p and Bur2p comprise a CDK-cyclin complex involved in transcriptional regulation through its phosphorylation of the carboxy-terminal domain of the largest subunit of RNA polymerase II
|
|
 |
 |
 |
| TFP3 |
CLS9VMA11YPL234C |
 |
Vacuolar ATPase V0 domain subunit c', involved in proton transport activity; hydrophobic integral membrane protein (proteolipid) containing four transmembrane segments; N and C termini are in the vacuolar lumen
|
|
 |
 |
 |
| ARF1 |
YDL192W |
 |
ADP-ribosylation factor, GTPase of the Ras superfamily involved in regulation of coated vesicle formation in intracellular trafficking within the Golgi; functionally interchangeable with Arf2p
|
|
 |
 |
 |
| PSH1 |
YOL054W |
 |
Nuclear protein, putative RNA polymerase II elongation factor; isolated as Pob3p/Spt16p-binding protein
|
|
 |
 |
 |
| GLC7 |
CID1DIS2YER133W |
 |
Catalytic subunit of type 1 serine/threonine protein phosphatase, involved in many processes including glycogen metabolism, sporulation, and mitosis; interacts with multiple regulatory subunits; predominantly isolated with Sds22p
|
|
 |
 |
 |
| GAL11 |
SPT13ABE1MED15YOL051W |
 |
Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; affects transcription by acting as target of activators and repressors
|
|
 |
 |
 |
| RRP42 |
YDL111C |
 |
Protein involved in rRNA processing; component of the exosome 3->5 exonuclease complex with Rrp4p, Rrp41p, Rrp43p and Dis3p
|
|
 |
 |
 |
| SKI6 |
RRP41ECM20YGR195W |
 |
3'-to-5' phosphorolytic exoribonuclease that is a subunit of the exosome; required for 3' processing of the 5.8S rRNA; involved in 3' to 5' mRNA degradation and translation inhibition of non-poly(A) mRNAs
|
|
 |
 |
 |
| KDM5C |
DXS1272EJARID1CMRXSJRP11-258C... |
 |
Jumonji, AT rich interactive domain 1C (RBP2-like)
|
|
 |
 |
 |
| MTR4 |
DOB1YJL050W |
 |
Dead-box family ATP dependent helicase required for mRNA export from the nucleus; co-factor of the exosome complex, required for 3' end formation of 5.8S rRNA
|
|
 |
 |
 |
| PAT1 |
MRT1YCR077C |
 |
Topoisomerase II-associated deadenylation-dependent mRNA-decapping factor; also required for faithful chromosome transmission, maintenance of rDNA locus stability, and protection of mRNA 3'-UTRs from trimming; functionally linked to Pab1p
|
|
 |
 |
 |
| LSM3 |
SMX4USS2YLR438C-A |
 |
Lsm (Like Sm) protein; part of heteroheptameric complexes (Lsm2p-7p and either Lsm1p or 8p): cytoplasmic Lsm1p complex involved in mRNA decay; nuclear Lsm8p complex part of U6 snRNP and possibly involved in processing tRNA, snoRNA, and rRNA
|
|
 |
 |
 |
| WHI3 |
YNL197C |
 |
RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci; cytoplasmic retention factor for Cdc28p and associated cyclins; regulates cell fate and dose-dependently regulates the critical cell size required for passage through Start
|
|
 |
 |
 |
| DEF1 |
VID31YKL054C |
 |
RNAPII degradation factor, forms a complex with Rad26p in chromatin, enables ubiquitination and proteolysis of RNAPII present in an elongation complex
|
|
 |
 |
 |
| NST1 |
YNL091W |
 |
Protein of unknown function, mediates sensitivity to salt stress; interacts physically with the splicing factor Msl1p and also displays genetic interaction with MSL1
|
|
 |
 |
 |
| PIN4 |
MDT1YBL051C |
 |
Protein involved in G2/M phase progression and response to DNA damage, interacts with Rad53p; contains an RNA recognition motif, a nuclear localization signal, and several SQ/TQ cluster domains; hyperphosphorylated in response to DNA damage
|
|
 |
 |
 |
| MOT2 |
NOT4SIG1YER068W |
 |
Component of the CCR4-NOT complex, which has multiple roles in transcription regulation, mRNA degradation, and post-transcriptional modifications; with Ubc4p, ubiquitylates subunits of the nascent polypeptide-associated complex (NAC)
|
|
 |
 |
 |
| CAF130 |
YGR134W |
 |
Part of the evolutionarily-conserved CCR4-NOT transcriptional regulatory complex involved in controlling mRNA initiation, elongation, and degradation
|
|
 |
 |
 |
| UBC5 |
YDR059C |
 |
Ubiquitin-conjugating enzyme that mediates selective degradation of short-lived and abnormal proteins, central component of the cellular stress response; expression is heat inducible
|
|
 |
 |
 |
| HEK2 |
KHD1YBL032W |
 |
RNA binding protein with similarity to hnRNP-K that localizes to the cytoplasm and to subtelomeric DNA; required for the proper localization of ASH1 mRNA; involved in the regulation of telomere position effect and telomere length
|
|
 |
 |
 |
| ELP6 |
TOT6HAP3YMR312W |
 |
Subunit of Elongator complex, which is required for modification of wobble nucleosides in tRNA; required for Elongator structural integrity
|
|
 |
 |
 |
| ELP3 |
TOT3HPA1YPL086C |
 |
Subunit of Elongator complex, which is required for modification of wobble nucleosides in tRNA; exhibits histone acetyltransferase activity that is directed to histones H3 and H4; disruption confers resistance to K. lactis zymotoxin
|
|
 |
 |
 |
| IKI1 |
TOT5ELP5HAP2YHR187W |
 |
Subunit of Elongator complex, which is required for modification of wobble nucleosides in tRNA; iki1 mutations confer resistance to the K. lactis toxin zymocin
|
|
 |
 |
 |
| NUP159 |
NUP158RAT7YIL115C |
 |
Nucleoporin, subunit of the nuclear pore complex that is found exclusively on the cytoplasmic side, forms a subcomplex with Nup82p and Nsp1p, required for mRNA export
|
|
 |
 |
 |
| MSS18 |
YPR134W |
 |
Nuclear encoded protein needed for efficient splicing of mitochondrial COX1 aI5beta intron; mss18 mutations block cleavage of 5' exon - intron junction; phenotype of intronless strain suggests additional functions
|
|
 |
 |
 |
| AEP3 |
YPL005W |
 |
Peripheral mitochondrial inner membrane protein, located on the matrix face of the membrane; stabilizes the bicistronic AAP1-ATP6 mRNA encoding subunits 6 and 8 of the ATP synthase complex
|
|
 |
 |
 |
| ELP4 |
TOT7HAP1YPL101W |
 |
Subunit of Elongator complex, which is required for modification of wobble nucleosides in tRNA; required for Elongator structural integrity
|
|
 |
 |
 |
| YMR085W |
YMR085W |
 |
Putative protein of unknown function; YMR085W and adjacent ORF YMR084W are merged in related strains
|
|
 |
 |
 |
| DEG1 |
PUS3YFL001W |
 |
Non-essential tRNA:pseudouridine synthase, introduces pseudouridines at position 38 or 39 in tRNA, important for maintenance of translation efficiency and normal cell growth, localizes to both the nucleus and cytoplasm
|
|
 |
 |
 |
| ESA1 |
TAS1YOR244W |
 |
Histone acetyltransferase catalytic subunit of the native multisubunit complex (NuA4) that acetylates four conserved internal lysines of histone H4 N-terminal tail; required for cell cycle progression
|
|
 |
 |
 |
| SGV1 |
BUR1YPR161C |
 |
Cyclin (Bur2p)-dependent protein kinase that functions in transcriptional regulation; phosphorylates the carboxy-terminal domain of Rpo21p, which is the largest subunit of RNA polymerase II; regulated by Cak1p
|
|
 |
 |
 |
| MAK32 |
YCR019W |
 |
Protein necessary for structural stability of L-A double-stranded RNA-containing particles
|
|
 |
 |
 |
| HCR1 |
YLR192C |
 |
Dual function protein involved in translation initiation as a substoichiometric component of eukaryotic translation initiation factor 3 (eIF3) and required for processing of 20S pre-rRNA; binds to eIF3 subunits Rpg1p and Prt1p and 18S rRNA
|
|
 |
 |
 |
| IKI3 |
TOT1ELP1YLR384C |
 |
Subunit of Elongator complex, which is required for modification of wobble nucleosides in tRNA; maintains structural integrity of Elongator; homolog of human IKAP, mutations in which cause familial dysautonomia (FD)
|
|
 |
 |
 |
| PAP2 |
TRF4YOL115W |
 |
Catalytic subunit of TRAMP (Trf4/Pap2p-Mtr4p-Air1p/2p), a nuclear poly (A) polymerase complex involved in RNA quality control; catalyzes polyadenylation of unmodified tRNAs, and snoRNA and rRNA precursors; disputed role as a DNA polymerase
|
|
 |
 |
 |
| LTV1 |
YKL2YKL143W |
 |
Component of the GSE complex, which is required for proper sorting of amino acid permease Gap1p; required for ribosomal small subunit export from nucleus; required for growth at low temperature
|
|
 |
 |
 |
| KEM1 |
SKI1DST2RAR5YGL173C |
 |
Evolutionarily-conserved 5'-3' exonuclease component of cytoplasmic processing (P) bodies involved in mRNA decay; plays a role in microtubule-mediated processes, filamentous growth, ribosomal RNA maturation, and telomere maintenance
|
|
 |
 |
 |
| RPS8A |
YBL072C |
 |
Protein component of the small (40S) ribosomal subunit; identical to Rps8Bp and has similarity to rat S8 ribosomal protein
|
|
 |
 |
 |
| TUF1 |
YOR187W |
 |
Mitochondrial translation elongation factor Tu; comprises both GTPase and guanine nucleotide exchange factor activities, while these activities are found in separate proteins in S. pombe and humans
|
|
 |
 |
 |
| EAF6 |
YJR082C |
 |
Subunit of the NuA4 acetyltransferase complex that acetylates histone H4 and NuA3 acetyltransferase complex that acetylates histone H3
|
|
 |
 |
 |
| NOC4 |
UTP19YPR144C |
 |
Nucleolar protein, forms a complex with Nop14p that mediates maturation and nuclear export of 40S ribosomal subunits
|
|
 |
 |
 |
| EAF5 |
YEL018W |
 |
Esa1p-associated factor, non-essential subunit of the NuA4 acetyltransferase complex
|
|
 |
 |
 |
| FPR1 |
RBP1FKB1YNL135C |
 |
Peptidyl-prolyl cis-trans isomerase (PPIase), binds to the drugs FK506 and rapamycin; also binds to the nonhistone chromatin binding protein Hmo1p and may regulate its assembly or function
|
|
 |
 |
 |
| HIR2 |
SPT1YOR038C |
 |
Non-essential transcriptional corepressor involved in the cell cycle-regulated transcription of histone H2A, H2B, H3, and H4 genes; recruits Swi-Snf complexes to histone gene promoters; promotes heterochromatic gene silencing with Asf1p
|
|
 |
 |
 |
| NOP12 |
YOL041C |
 |
Nucleolar protein, required for pre-25S rRNA processing; contains an RNA recognition motif (RRM) and has similarity to Nop13p, Nsr1p, and putative orthologs in Drosophila and S. pombe
|
|
 |
 |
 |
| SEH1 |
YGL100W |
 |
Nuclear pore protein that is part of the evolutionarily conserved Nup84p complex (Nup84p, Nup85p, Nup120p, Nup145p, and Seh1p); homologous to Sec13p
|
|
 |
 |
 |
| MOD5 |
YOR274W |
 |
Delta 2-isopentenyl pyrophosphate:tRNA isopentenyl transferase, required for biosynthesis of the modified base isopentenyladenosine in mitochondrial and cytoplasmic tRNAs; gene is nuclear and encodes two isozymic forms
|
|
 |
 |
 |
| TAF9 |
TAF17YMR236W |
 |
Subunit (17 kDa) of TFIID and SAGA complexes, involved in RNA polymerase II transcription initiation and in chromatin modification, similar to histone H3
|
|
 |
 |
 |
| RRP6 |
YOR001W |
 |
Exonuclease component of the nuclear exosome; contributes to the quality-control system that retains and degrades aberrant mRNAs in the nucleus
|
|
 |
 |
 |
| RAD7 |
YJR052W |
 |
Protein that recognizes and binds damaged DNA in an ATP-dependent manner (with Rad16p) during nucleotide excision repair; subunit of Nucleotide Excision Repair Factor 4 (NEF4) and the Elongin-Cullin-Socs (ECS) ligase complex
|
|
 |
 |
 |
| DMA2 |
CHF2YNL116W |
 |
Protein involved in regulating spindle position and orientation, functionally redundant with Dma1p; homolog of S. pombe Dma1 and H. sapiens Chfr
|
|
 |
 |
 |
| ECM4 |
GTO2YKR076W |
 |
Omega class glutathione transferase; not essential; similar to Ygr154cp; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm
|
|
 |
 |
 |
| RTT101 |
CUL8YJL047C |
 |
Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex; deletion phenotype suggests a role in anaphase progression; interacts with Mms22p and implicated in Mms22-dependent DNA repair; modified by the ubiquitin-like protein, Rub1p
|
|
 |
 |
 |
| RPA34 |
YJL148W |
 |
RNA polymerase I subunit A34.5
|
|
 |
 |
 |
| NUP116 |
NSP116YMR047C |
 |
Subunit of the nuclear pore complex (NPC) that is localized to both sides of the pore; contains a repetitive GLFG motif that interacts with mRNA export factor Mex67p and with karyopherin Kap95p; homologous to Nup100p
|
|
 |
 |
 |
| SLH1 |
YGR271W |
 |
Putative RNA helicase related to Ski2p, involved in translation inhibition of non-poly(A) mRNAs; required for repressing propagation of dsRNA viruses
|
|
 |
 |
 |
| RBG2 |
GIR1YGR173W |
 |
Protein with similarity to mammalian developmentally regulated GTP-binding protein
|
|
 |
 |
 |
| YBR141C |
YBR141C |
 |
Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the nucleolus; YBR141C is not an essential gene
|
|
 |
 |
 |
| ECM16 |
DHR1YMR128W |
 |
Essential DEAH-box ATP-dependent RNA helicase specific to the U3 snoRNP, predominantly nucleolar in distribution, required for 18S rRNA synthesis
|
|
 |
 |
 |
| PRP24 |
YMR268C |
 |
Splicing factor that reanneals U4 and U6 snRNPs during spliceosome recycling
|
|
 |
 |
 |
| TIF2 |
YJL138C |
 |
Translation initiation factor eIF4A, identical to Tif1p; DEA(D/H)-box RNA helicase that couples ATPase activity to RNA binding and unwinding; forms a dumbbell structure of two compact domains connected by a linker; interacts with eIF4G
|
|
 |
 |
 |
| DST1 |
PPR2YGL043W |
 |
General transcription elongation factor TFIIS, enables RNA polymerase II to read through blocks to elongation by stimulating cleavage of nascent transcripts stalled at transcription arrest sites
|
|
 |
 |
 |
| POP7 |
RPP2YBR167C |
 |
Subunit of both RNase MRP, which cleaves pre-rRNA, and nuclear RNase P, which cleaves tRNA precursors to generate mature 5' ends
|
|
 |
 |
 |
| SUP35 |
GST1PNM2SUP2YDR172W |
 |
Translation termination factor eRF3; altered protein conformation creates the [PSI(+)] prion, a dominant cytoplasmically inherited protein aggregate that alters translational fidelity and creates a nonsense suppressor phenotype
|
|
 |
 |
 |
| RPA14 |
YDR156W |
 |
RNA polymerase I subunit A14
|
|
 |
 |
 |
| SPT20 |
ADA5YOL148C |
 |
Subunit of the SAGA transcriptional regulatory complex, involved in maintaining the integrity of the complex
|
|
 |
 |
 |
| URE2 |
YNL229C |
 |
Nitrogen catabolite repression transcriptional regulator that acts by inhibition of GLN3 transcription in good nitrogen source; altered form of Ure2p creates [URE3] prion
|
|
 |
 |
 |
| BUL1 |
SMM2RDS1DAG1YMR275C |
 |
Ubiquitin-binding component of the Rsp5p E3-ubiquitin ligase complex, functional homolog of Bul2p, disruption causes temperature-sensitive growth, overexpression causes missorting of amino acid permeases
|
|
 |
 |
 |
| PIB1 |
YDR313C |
 |
RING-type ubiquitin ligase of the endosomal and vacuolar membranes, binds phosphatidylinositol(3)-phosphate; contains a FYVE finger domain
|
|
 |
 |
 |
| DOA4 |
NPI2SSV7MUT4YDR069C |
 |
Ubiquitin isopeptidase, required for recycling ubiquitin from proteasome-bound ubiquitinated intermediates, acts at the late endosome/prevacuolar compartment to recover ubiquitin from ubiquitinated membrane proteins en route to the vacuole
|
|
 |
 |
 |
| RPA49 |
YNL248C |
 |
RNA polymerase I subunit A49
|
|
 |
 |
 |
| SNF2 |
SWI2GAM1TYE3YOR290C |
 |
Catalytic subunit of the SWI/SNF chromatin remodeling complex involved in transcriptional regulation; contains DNA-stimulated ATPase activity; functions interdependently in transcriptional activation with Snf5p and Snf6p
|
|
 |
 |
 |
| VMA4 |
YOR332W |
 |
Subunit E of the eight-subunit V1 peripheral membrane domain of the vacuolar H+-ATPase (V-ATPase), an electrogenic proton pump found throughout the endomembrane system; required for the V1 domain to assemble onto the vacuolar membrane
|
|
 |
 |
 |
| VPS27 |
GRD11VPL23VPT27YNR006W |
 |
Endosomal protein that forms a complex with Hse1p; required for recycling Golgi proteins, forming lumenal membranes and sorting ubiquitinated proteins destined for degradation; has Ubiquitin Interaction Motifs which bind ubiquitin (Ubi4p)
|
|
 |
 |
 |
| VPS38 |
VPL17YLR360W |
 |
Part of a Vps34p phosphatidylinositol 3-kinase complex that functions in carboxypeptidase Y (CPY) sorting; binds Vps30p and Vps34p to promote production of phosphatidylinositol 3-phosphate (PtdIns3P) which stimulates kinase activity
|
|
 |
 |
 |
| EST1 |
YLR233C |
 |
TLC1 RNA-associated factor involved in telomere length regulation as the recruitment subunit of the telomerase holoenzyme, has a possible role in activating Est2p-TLC1-RNA bound to the telomere
|
|
 |
 |
 |
| EAF1 |
VID21YDR359C |
 |
Component of the NuA4 histone acetyltransferase complex
|
|
 |
 |
 |
| SNF5 |
HAF4SWI10TYE4YBR289W |
 |
Subunit of the SWI/SNF chromatin remodeling complex involved in transcriptional regulation; functions interdependently in transcriptional activation with Snf2p and Snf6p
|
|
 |
 |
 |
| STE4 |
HMD2YOR212W |
 |
G protein beta subunit, forms a dimer with Ste18p to activate the mating signaling pathway, forms a heterotrimer with Gpa1p and Ste18p to dampen signaling; may recruit Rho1p to the polarized growth site during mating; contains WD40 repeats
|
|
 |
 |
 |
| TAF13 |
TAF19FUN81YML098W |
 |
TFIID subunit (19 kDa), involved in RNA polymerase II transcription initiation, similar to histone H4 with atypical histone fold motif of Spt3-like transcription factors
|
|
 |
 |
 |
| SSN3 |
NUT7GIG2CDK8YPL042C |
 |
Cyclin-dependent protein kinase, component of RNA polymerase II holoenzyme; involved in phosphorylation of the RNA polymerase II C-terminal domain; involved in glucose repression
|
|
 |
 |
 |
| ADA2 |
SWI8YDR448W |
 |
Transcription coactivator, component of the ADA and SAGA transcriptional adaptor/HAT (histone acetyltransferase) complexes
|
|
 |
 |
 |
| SPT10 |
CRE1SUD1YJL127C |
 |
Putative histone acetylase, sequence-specific activator of histone genes, binds specifically and highly cooperatively to pairs of UAS elements in core histone promoters, functions at or near the TATA box
|
|
 |
 |
 |
| STE11 |
YLR362W |
 |
Signal transducing MEK kinase involved in pheromone response and pseudohyphal/invasive growth pathways where it phosphorylates Ste7p, and the high osmolarity response pathway, via phosphorylation of Pbs2p; regulated by Ste20p and Ste50p
|
|
 |
 |
 |
| NHP6B |
YBR090C-AYBR089C-A |
 |
High-mobility group non-histone chromatin protein, functionally redundant with Nhp6Ap; homologous to mammalian high mobility group proteins 1 and 2; acts to recruit transcription factor Rcs1p to certain promoters
|
|
 |
 |
 |
| NHP6A |
YPR052C |
 |
High-mobility group non-histone chromatin protein, functionally redundant with Nhp6Bp; homologous to mammalian high mobility group proteins 1 and 2; acts to recruit transcription factor Rcs1p to certain promoters
|
|
 |
 |
 |
| BUD14 |
YAR014C |
 |
Protein involved in bud-site selection, Bud14p-Glc7p complex functions as a cortical regulator of dynein; diploid mutants display a random budding pattern instead of the wild-type bipolar pattern
|
|
 |
 |
 |
| VPS4 |
END13GRD13VPT10YPR173C |
 |
AAA-type ATPase that is regulated by Vta1p; required for late endosome to vacuole transport; catalyzes the release of an endosomal membrane-associated class E VPS protein complex; regulates cellular sterol metabolism
|
|
 |
 |
 |
| MRT4 |
YKL009W |
 |
Protein involved in mRNA turnover and ribosome assembly, localizes to the nucleolus
|
|
 |
 |
 |
| LOT5 |
YKL183W |
 |
Protein of unknown function; gene expression increases in cultures shifted to a lower temperature
|
|
 |
 |
 |
| SOD1 |
CRS4YJR104C |
 |
Cytosolic superoxide dismutase; some mutations are analogous to those that cause ALS (amyotrophic lateral sclerosis) in humans
|
|
 |
 |
 |
| HSL7 |
YBR133C |
 |
Protein arginine N-methyltransferase that exhibits septin and Hsl1p-dependent bud neck localization and periodic Hsl1p-dependent phosphorylation; required along with Hsl1p for bud neck recruitment, phosphorylation, and degradation of Swe1p
|
|
 |
 |
 |
| VAM10 |
YOR068C |
 |
Protein involved in vacuole morphogenesis; acts at an early step of homotypic vacuole fusion that is required for vacuole tethering
|
|
 |
 |
 |
| YPL168W |
YPL168W |
 |
Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the mitochondrion; expression may be cell cycle-regulated
|
|
 |
 |
 |
| NPL4 |
HRD4YBR170C |
 |
Endoplasmic reticulum and nuclear membrane protein, forms a complex with Cdc48p and Ufd1p that recognizes ubiquitinated proteins in the endoplasmic reticulum and delivers them to the proteasome for degradation
|
|
 |
 |
 |
| VMA13 |
CLS11YPR036W |
 |
Subunit H of the eight-subunit V1 peripheral membrane domain of the vacuolar H+-ATPase (V-ATPase), an electrogenic proton pump found throughout the endomembrane system; serves as an activator or a structural stabilizer of the V-ATPase
|
|
 |
 |
 |
| VPS5 |
PEP10GRD2VPT5YOR069W |
 |
Nexin-1 homolog required for localizing membrane proteins from a prevacuolar/late endosomal compartment back to the late Golgi apparatus; structural component of the retromer membrane coat complex; forms a retromer subcomplex with Vps17p
|
|
 |
 |
 |
| BRO1 |
ASI6NPI3LPF2YPL084W |
 |
Cytoplasmic class E vacuolar protein sorting (VPS) factor that coordinates deubiquitination in the multivesicular body (MVB) pathway by recruiting Doa4p to endosomes
|
|
 |
 |
 |
| VPS8 |
VPT8FUN15YAL002W |
 |
Membrane-associated protein that interacts with Vps21p to facilitate soluble vacuolar protein localization; component of the CORVET complex; required for localization and trafficking of the CPY sorting receptor; contains RING finger motif
|
|
 |
 |
 |
| MMS22 |
SLM2YLR320W |
 |
Protein involved in resistance to ionizing radiation; acts with Mms1p in a repair pathway that may be involved in resolving replication intermediates or preventing the damage caused by blocked replication forks
|
|
 |
 |
 |
| UBP6 |
YFR010W |
 |
Ubiquitin-specific protease situated in the base subcomplex of the 26S proteasome, releases free ubiquitin from branched polyubiquitin chains; deletion causes hypersensitivity to cycloheximide and other toxic compounds
|
|
 |
 |
 |
| YKR005C |
YKR005C |
 |
Putative protein of unknown function
|
|
 |
 |
 |
| PPN1 |
PHM5YDR452W |
 |
Vacuolar endopolyphosphatase with a role in phosphate metabolism; functions as a homodimer
|
|
 |
 |
 |
| GUF1 |
YLR289W |
 |
Mitochondrial GTPase of unknown function, similar to E. coli elongation factor-type GTP-binding protein LepA and to LK1236.1 from Caenorhabditis elegans
|
|
 |
 |
 |
| RAD6 |
UBC2PSO8YGL058W |
 |
Ubiquitin-conjugating enzyme (E2), involved in postreplication repair (with Rad18p), sporulation, telomere silencing, and ubiquitin-mediated N-end rule protein degradation (with Ubr1p)
|
|
 |
 |
 |
| NNT1 |
YLR285W |
 |
Putative nicotinamide N-methyltransferase, has a role in rDNA silencing and in lifespan determination
|
|
 |
 |
 |
| DOA1 |
UFD3ZZZ4YKL213C |
 |
WD repeat protein required for ubiquitin-mediated protein degradation, forms complex with Cdc48p, plays a role in controlling cellular ubiquitin concentration; also promotes efficient NHEJ in postdiauxic/stationary phase
|
|
 |
 |
 |
| CBF1 |
CPF1CEP1YJR060W |
 |
Helix-loop-helix protein that binds the motif CACRTG, which is present at several sites including MET gene promoters and centromere DNA element I (CDEI); required for nucleosome positioning at this motif; targets Isw1p to DNA
|
|
 |
 |
 |
| CAF120 |
YNL278W |
 |
Part of the evolutionarily-conserved CCR4-NOT transcriptional regulatory complex involved in controlling mRNA initiation, elongation, and degradation
|
|
 |
 |
 |
| PGD1 |
MED3HRS1YGL025C |
 |
Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; essential for basal and activated transcription; direct target of Cyc8p-Tup1p transcriptional corepressor
|
|
 |
 |
 |