| Name |
Aliases |
 |
Description |
| Evidence Code |
| Role |
Source [Interactions] |
|
|
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| TFG1 |
RAP74SSU71YGR186W |
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TFIIF (Transcription Factor II) largest subunit; involved in both transcription initiation and elongation of RNA polymerase II; homologous to human RAP74|Tfg1p; protein coding
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| SPT15 |
BTF1TBP1YER148W |
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Spt15p|TATA-binding protein, general transcription factor that interacts with other factors to form the preinitiation complex at promoters, essential for viability; protein coding
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| TFG2 |
YGR005C |
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TFIIF (Transcription Factor II) middle subunit; involved in both transcription initiation and elongation of RNA polymerase II; homologous to human RAP30|Tfg2p; protein coding
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| INO80 |
YGL150C |
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ATPase that forms a large complex, containing actin and several actin-related proteins, that has chromatin remodeling activity and 3' to 5' DNA helicase activity in vitro; shows similarity to the Snf2p family of ATPases|Ino80p; protein coding
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| TAF1 |
TAF130TAF145YGR274C |
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TFIID subunit (145 kDa), involved in RNA polymerase II transcription initiation, has histone acetyltransferase activity, involved in promoter binding and G1/S progression|Taf1p; protein coding
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| TAF2 |
TAF150TSM1YCR042C |
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TFIID subunit (150 kDa), involved in RNA polymerase II transcription initiation|Taf2p; protein coding
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| SAS3 |
YBL052C |
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Histone acetyltransferase catalytic subunit of NuA3 complex that acetylates histone H3, involved in transcriptional silencing; homolog of the mammalian MOZ proto-oncogene; sas3 gcn5 double mutation confers lethality|Sas3p; protein coding
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| RPB2 |
RPB150RPO22SIT2YOR151C |
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RNA polymerase II second largest subunit B150, part of central core; similar to bacterial beta subunit|Rpb2p; protein coding
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| SNF6 |
YHL025W |
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Snf6p|Subunit of the SWI/SNF chromatin remodeling complex involved in transcriptional regulation; functions interdependently in transcriptional activation with Snf2p and Snf5p; protein coding
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| SWI3 |
TYE2YJL176C |
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Subunit of the SWI/SNF chromatin remodeling complex, which regulates transcription by remodeling chromosomes; required for transcription of many genes, including ADH1, ADH2, GAL1, HO, INO1 and SUC2|Swi3p; protein coding
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| RPO21 |
RPB1RPB220SUA8YDL140C |
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RNA polymerase II largest subunit B220, part of central core; phosphorylation of C-terminal heptapeptide repeat domain regulates association with transcription and splicing factors; similar to bacterial beta-prime|Rpo21p; protein coding
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| RPB5 |
YBR154C |
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RNA polymerase subunit ABC27, common to RNA polymerases I, II, and III; contacts DNA and affects transactivation|Rpb5p; protein coding
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| RPB9 |
SHI1SSU73YGL070C |
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RNA polymerase II subunit B12.6; contacts DNA; mutations affect transcription start site; involved in telomere maintenance|Rpb9p; protein coding
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| ARP4 |
ACT3YJL081C |
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Arp4p|Nuclear actin-related protein involved in chromatin remodeling, component of chromatin-remodeling enzyme complexes; protein coding
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| ARP9 |
SWP59RSC12YMR033W |
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Arp9p|Component of both the SWI/SNF and RSC chromatin remodeling complexes; actin-related protein involved in transcriptional regulation; protein coding
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| TAF8 |
TAF65YML114C |
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TFIID subunit (65 kDa), involved in RNA polymerase II transcription initiation|Taf8p; protein coding
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| IES5 |
YER092W |
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Ies5p|Protein that associates with the INO80 chromatin remodeling complex under low-salt conditions; protein coding
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| ARP8 |
YOR141C |
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Arp8p|Nuclear actin-related protein involved in chromatin remodeling, component of chromatin-remodeling enzyme complexes; protein coding
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| RVB2 |
TIH2TIP49TIP49BYPL235W |
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Essential protein involved in transcription regulation; component of chromatin remodeling complexes; required for assembly and function of the INO80 complex; member of the RUVB-like protein family|Rvb2p; protein coding
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| RPO26 |
RPB6YPR187W |
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RNA polymerase subunit ABC23, common to RNA polymerases I, II, and III; part of central core; similar to bacterial omega subunit|Rpo26p; protein coding
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| RPB4 |
CTF15YJL140W |
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RNA polymerase II subunit B32; forms two subunit dissociable complex with Rpb7p; dispensable under some environmental conditions; involved in export of mRNA to cytoplasm under stress conditions; involved in telomere maintenance|Rpb4p; protein coding
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| TAF13 |
FUN81TAF19YML098W |
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TFIID subunit (19 kDa), involved in RNA polymerase II transcription initiation, similar to histone H4 with atypical histone fold motif of Spt3-like transcription factors|Taf13p; protein coding
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| SNF2 |
GAM1HAF1SWI2YOR290C |
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Catalytic subunit of the SWI/SNF chromatin remodeling complex involved in transcriptional regulation; contains DNA-stimulated ATPase activity; functions interdependently in transcriptional activation with Snf5p and Snf6p|Snf2p; protein coding
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| ARP5 |
YNL059C |
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Arp5p|Nuclear actin-related protein involved in chromatin remodeling, component of chromatin-remodeling enzyme complexes; protein coding
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| SRB4 |
MED17YER022W |
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Srb4p|Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; essential for transcriptional regulation; protein coding
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| SNF5 |
HAF4SWI10TYE4YBR289W |
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Snf5p|Subunit of the SWI/SNF chromatin remodeling complex involved in transcriptional regulation; functions interdependently in transcriptional activation with Snf2p and Snf6p; protein coding
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| RPB3 |
YIL021W |
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RNA polymerase II third largest subunit B44, part of central core; similar to prokaryotic alpha subunit|Rpb3p; protein coding
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| SNF12 |
SWP73YNR023W |
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73 kDa subunit of the SWI/SNF chromatin remodeling complex involved in transcriptional regulation; homolog of Rsc6p subunit of the RSC chromatin remodeling complex; deletion mutants are temperature-sensitive|Snf12p; protein coding
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| STH1 |
NPS1YIL126W |
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ATPase component of the RSC chromatin remodeling complex; required for expression of early meiotic genes; essential helicase-related protein homologous to Snf2p|Sth1p; protein coding
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| GAL11 |
ABE1MED15RAR3YOL051W |
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Gal11p|Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; affects transcription by acting as target of activators and repressors; protein coding
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| IES4 |
YOR189W |
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Component of the INO80 chromatiin remodeling complex and target of the Mec1p/Tel1p DNA damage signaling pathway; proposed to link chromatin remodeling to replication checkpoint responses|Ies4p; protein coding
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| IES1 |
YFL013C |
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Ies1p|Subunit of the INO80 chromatin remodeling complex; protein coding
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| SNF11 |
YDR073W |
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Snf11p|Subunit of the SWI/SNF chromatin remodeling complex involved in transcriptional regulation; interacts with a highly conserved 40-residue sequence of Snf2p; protein coding
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| IES3 |
YLR052W |
 |
Ies3p|Subunit of the INO80 chromatin remodeling complex; protein coding
|
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| NHP10 |
HMO2YDL002C |
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Nhp10p|Protein related to mammalian high mobility group proteins; likely component of the INO80 complex, which is an ATP-dependent chromatin-remodeling complex; protein coding
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| ACT1 |
ABY1END7YFL039C |
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Act1p|Actin, structural protein involved in cell polarization, endocytosis, and other cytoskeletal functions; protein coding
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| RVB1 |
TIH1TIP48TIP49AYDR190C |
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Essential protein involved in transcription regulation; component of chromatin remodeling complexes; required for assembly and function of the INO80 complex; member of the RUVB-like protein family|Rvb1p; protein coding
|
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| RPB8 |
YOR224C |
 |
RNA polymerase subunit ABC14.5, common to RNA polymerases I, II, and III|Rpb8p; protein coding
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| RPB7 |
YDR404C |
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RNA polymerase II subunit B16; forms two subunit dissociable complex with Rpb4p|Rpb7p; protein coding
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| MOT1 |
BUR3LPF4YPL082C |
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Essential abundant protein involved in regulation of transcription, removes Spt15p (TBP) from DNA via its C-terminal ATPase activity, forms a complex with TBP that binds TATA DNA with high affinity but with altered specificity|Mot1p; protein coding
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| RTT102 |
YGR275W |
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Component of both the SWI/SNF and RSC chromatin remodeling complexes, suggested role in chromosome maintenance; possible weak regulator of Ty1 transposition|Rtt102p; protein coding
|
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| SMT3 |
YDR510W |
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Smt3p|Ubiquitin-like protein of the SUMO family, conjugated to lysine residues of target proteins; regulates chromatid cohesion, chromosome segregation, APC-mediated proteolysis, DNA replication and septin ring dynamics; protein coding
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| ARP7 |
SWP61RSC11YPR034W |
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Arp7p|Component of both the SWI/SNF and RSC chromatin remodeling complexes; actin-related protein involved in transcriptional regulation; protein coding
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| TAF3 |
TAF47YPL011C |
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TFIID subunit (47 kDa), involved in promoter binding and RNA polymerase II transcription initiation|Taf3p; protein coding
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| SWI1 |
ADR6GAM3LPA1YPL016W |
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Subunit of the SWI/SNF chromatin remodeling complex, which regulates transcription by remodeling chromosomes; required for transcription of many genes, including ADH1, ADH2, GAL1, HO, INO1 and SUC2|Swi1p; protein coding
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| RPB11 |
YOL005C |
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RNA polymerase II subunit B12.5; part of central core; similar to Rpc19p and bacterial alpha subunit|Rpb11p; protein coding
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| RGR1 |
MED14YLR071C |
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Rgr1p|Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; required for glucose repression, HO repression, RME1 repression and sporulation; protein coding
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| YAF9 |
YNL107W |
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Subunit of both the NuA4 histone H4 acetyltransferase complex and the SWR1 complex, may function to antagonize silencing near telomeres; interacts directly with Swc4p, has homology to human leukemogenic protein AF9, contains a YEATS domain|Yaf9p; protein coding
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| SIN4 |
BEL2GAL22MED16YNL236W |
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Sin4p|Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; contributes to both postive and negative transcriptional regulation; dispensible for basal transcription; protein coding
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| NUT1 |
MED5YGL151W |
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Component of the RNA polymerase II mediator complex, which is required for transcriptional activation and also has a role in basal transcription|Nut1p; protein coding
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| IES2 |
YNL215W |
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Ies2p|Protein that associates with the INO80 chromatin remodeling complex under low-salt conditions; protein coding
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| SAP185 |
YJL098W |
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Protein that forms a complex with the Sit4p protein phosphatase and is required for its function; member of a family of similar proteins including Sap4p, Sap155p, and Sap190p|Sap185p; protein coding
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| MED1 |
YPR070W |
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Med1p|Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; essential for transcriptional regulation; protein coding
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| GCN4 |
AAS3ARG9YEL009C |
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Gcn4p|Transcriptional activator of amino acid biosynthetic genes in response to amino acid starvation; expression is tightly regulated at both the transcriptional and translational levels; protein coding
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| TAF12 |
TAF61TAF68YDR145W |
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Subunit (61/68 kDa) of TFIID and SAGA complexes, involved in RNA polymerase II transcription initiation and in chromatin modification, similar to histone H2A|Taf12p; protein coding
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| YNG1 |
YOR29-15YOR064C |
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Subunit of the NuA3 histone acetyltransferase complex that acetylates histone H3; contains PHD finger domain that interacts with methylated histone H3, has similarity to the human tumor suppressor ING1|Yng1p; protein coding
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| MUS81 |
SLX3YDR386W |
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Helix-hairpin-helix protein, involved in DNA repair and replication fork stability; functions as an endonuclease in complex with Mms4p; interacts with Rad54p|Mus81p; protein coding
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| TAF5 |
TAF90YBR198C |
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Subunit (90 kDa) of TFIID and SAGA complexes, involved in RNA polymerase II transcription initiation and in chromatin modification|Taf5p; protein coding
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| HAP4 |
YKL109W |
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Hap4p|Subunit of the heme-activated, glucose-repressed Hap2p/3p/4p/5p CCAAT-binding complex, a transcriptional activator and global regulator of respiratory gene expression; provides the principal activation function of the complex; protein coding
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| MED4 |
YOR174W |
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Med4p|Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; essential for transcriptional regulation; protein coding
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| MCX1 |
YBR227C |
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Mcx1p|Mitochondrial ATP-binding protein, possibly a mitochondrial chaperone with non-proteolytic function; similar to bacterial ClpX proteins; protein coding
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| YHR113W |
YHR113W |
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Cytoplasmic aspartyl aminopeptidase; cleaves unblocked N-terminal acidic amino acid residues from peptide substrates; forms a 12 subunit homo-oligomeric complex; M18 metalloprotease family member; may interact with ribosomes|Yhr113wp; protein coding
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| MED11 |
YMR112C |
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Med11p|Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; essential protein; protein coding
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| PRE7 |
PRS3YBL041W |
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20S proteasome beta-type subunit|Pre7p; protein coding
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| MED2 |
YDL005C |
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Med2p|Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; essential for transcriptional regulation; protein coding
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| MED6 |
YHR058C |
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Med6p|Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; essential for transcriptional regulation; protein coding
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| TFB4 |
YPR056W |
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Subunit of TFIIH complex, involved in transcription initiation, similar to 34 kDa subunit of human TFIIH; interacts with Ssl1p|Tfb4p; protein coding
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| TAF6 |
TAF60YGL112C |
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Subunit (60 kDa) of TFIID and SAGA complexes, involved in transcription initiation of RNA polymerase II and in chromatin modification, similar to histone H4|Taf6p; protein coding
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| MED7 |
YOL135C |
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Med7p|Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; essential for transcriptional regulation; protein coding
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| TAF7 |
TAF67YMR227C |
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TFIID subunit (67 kDa), involved in RNA polymerase II transcription initiation|Taf7p; protein coding
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| PGD1 |
HRS1MED3YGL025C |
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Pgd1p|Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; essential for basal and activated transcription; direct target of Cyc8p-Tup1p transcriptional corepressor; protein coding
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| NUT2 |
MED10YPR168W |
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Nut2p|Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; required for transcriptional activation and has a role in basal transcription; protein coding
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| CSE2 |
MED9YNR010W |
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Cse2p|Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; component of the Med9/10 module; required for regulation of RNA polymerase II activity; protein coding
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| ROX3 |
MED19NUT3SSN7YBL093C |
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Rox3p|Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; protein coding
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| TAF4 |
MPT1TAF48TSG2YMR005W |
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TFIID subunit (48 kDa), involved in RNA polymerase II transcription initiation; potential Cdc28p substrate|Taf4p; protein coding
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| IES6 |
YEL044W |
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Ies6p|Protein that associates with the INO80 chromatin remodeling complex under low-salt conditions; protein coding
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| TAF10 |
TAF23TAF25YDR167W |
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Subunit (145 kDa) of TFIID and SAGA complexes, involved in RNA polymerase II transcription initiation and in chromatin modification|Taf10p; protein coding
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| RPC10 |
RPB12YHR143W-A |
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RNA polymerase subunit, found in RNA polymerase complexes I, II, and III|Rpc10p; protein coding
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| TAF9 |
TAF17YMR236W |
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Subunit (17 kDa) of TFIID and SAGA complexes, involved in RNA polymerase II transcription initiation and in chromatin modification, similar to histone H3|Taf9p; protein coding
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| RPB10 |
YOR210W |
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RNA polymerase subunit ABC10-beta, common to RNA polymerases I, II, and III|Rpb10p; protein coding
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| TAF11 |
TAF40YML015C |
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TFIID subunit (40 kDa), involved in RNA polymerase II transcription initiation, similar to histone H3 with atypical histone fold motif of Spt3-like transcription factors|Taf11p; protein coding
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| MED8 |
YBR193C |
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Med8p|Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; essential for transcriptional regulation; protein coding
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| SPT7 |
GIT2YBR081C |
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Spt7p|Subunit of the SAGA transcriptional regulatory complex, involved in proper assembly of the complex; also present as a C-terminally truncated form in the SLIK/SALSA transcriptional regulatory complex; protein coding
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| SRB7 |
MED21YDR308C |
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Srb7p|Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; essential for transcriptional regulation; target of the global repressor Tup1p; protein coding
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| SPT5 |
YML010W |
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Protein that forms a complex with Spt4p and mediates both activation and inhibition of transcription elongation; Spt4p-Spt5p complex also plays a role in pre-mRNA processing|Spt5p; protein coding
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| SRB2 |
HRS2MED20YHR041C |
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Srb2p|Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; general transcription factor involved in telomere maintenance; protein coding
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| SRB6 |
MED22YBR253W |
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Srb6p|Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; essential for transcriptional regulation; protein coding
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| SRB5 |
MED18YGR104C |
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Srb5p|Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; essential for transcriptional regulation; involved in telomere maintenance; protein coding
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| RTT106 |
YNL206C |
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Protein with a role in regulation of Ty1 transposition|Rtt106p; protein coding
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| ISW1 |
SGN2YBR245C |
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Isw1p|Member of the imitation-switch (ISWI) class of ATP-dependent chromatin remodeling complexes; ATPase that forms a complex with Ioc2p and Ioc4p to regulate transcription elongation, and a complex with Ioc3p to repress transcription initiation; protein coding
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| UBR1 |
PTR1YGR184C |
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Ubiquitin-protein ligase (E3) that interacts with Rad6p/Ubc2p to ubiquitinate substrates of the N-end rule pathway; binds to the Rpn2p, Rpt1p, and Rpt6p proteins of the 19S particle of the 26S proteasome|Ubr1p; protein coding
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| IOC2 |
YLR095C |
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Ioc2p|Member of a complex (Isw1b) with Isw1p and Ioc4p that exhibits nucleosome-stimulated ATPase activity and acts within coding regions to coordinate transcription elongation with termination and processing, contains a PHD finger motif; protein coding
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| SKI3 |
SKI5YPR189W |
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Protein involved in exosome mediated 3' to 5' mRNA degradation and translation inhibition of non-poly(A) mRNAs; forms complex with Ski2p and Ski8p; required for repressing propagation of dsRNA viruses|Ski3p; protein coding
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| SAS4 |
YDR181C |
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Sas4p|Subunit of the SAS complex (Sas2p, Sas4p, Sas5p), which acetylates free histones and nucleosomes and regulates transcriptional silencing; required for the HAT activity of Sas2p; protein coding
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| SKI8 |
REC103YGL213C |
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Protein involved in exosome mediated 3' to 5' mRNA degradation and translation inhibition of non-poly(A) mRNAs as well as double-strand break formation during meiotic recombination; required for repressing propagation of dsRNA viruses|Ski8p; protein coding
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| PSY2 |
YNL201C |
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Psy2p|Putative subunit of an evolutionarily conserved protein phosphatase complex containing the catalytic subunit Pph3p and the regulatory subunit Psy4p; required for cisplatin and oxaliplatin resistance; localizes to nucleus; protein coding
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| BRE5 |
YNR051C |
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Bre5p|Ubiquitin protease cofactor, forms deubiquitination complex with Ubp3p that coregulates anterograde and retrograde transport between the endoplasmic reticulum and Golgi compartments; null is sensitive to brefeldin A; protein coding
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| ITC1 |
YGL133W |
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Component of the ATP-dependent Isw2p-Itc1p chromatin remodeling complex, required for repression of a-specific genes, repression of early meiotic genes during mitotic growth, and repression of INO1|Itc1p; protein coding
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| SSF1 |
YHR066W |
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Constituent of 66S pre-ribosomal particles, required for ribosomal large subunit maturation; functionally redundant with Ssf2p; member of the Brix family|Ssf1p; protein coding
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| SNU66 |
YOR308C |
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Component of the U4/U6.U5 snRNP complex involved in pre-mRNA splicing via spliceosome; has homology to human SART-1 and to an S. pombe protein; snu66 null mutation confers cold-sensitivity but is not lethal at normal growth temperatures|Snu66p; protein coding
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| BFA1 |
IBD1YJR053W |
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Bfa1p|Component of the GTPase-activating Bfa1p-Bub2p complex involved in multiple cell cycle checkpoint pathways that control exit from mitosis; protein coding
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| MFT1 |
MFT52YML062C |
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Mft1p|Subunit of the THO complex, which is a nuclear complex comprised of Hpr1p, Mft1p, Rlr1p, and Thp2p, that is involved in transcription elongation and mitotic recombination; involved in telomere maintenance; protein coding
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| RAD54 |
XRS1YGL163C |
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DNA-dependent ATPase, stimulates strand exchange by modifying the topology of double-stranded DNA; involved in the recombinational repair of double-strand breaks in DNA during vegetative growth and meiosis; member of the SWI/SNF family|Rad54p; protein coding
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| EAF3 |
YPR023C |
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Eaf3p|Esa1p-associated factor, nonessential component of the NuA4 acetyltransferase complex, homologous to Drosophila dosage compensation protein MSL3; protein coding
|
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| REV7 |
YIL139C |
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Processivity subunit of DNA polymerase zeta, which is involved in DNA repair and translesion synthesis; required for mutagenesis induced by DNA damage|Rev7p; protein coding
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| BMH1 |
APR6YER177W |
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14-3-3 protein, major isoform; controls proteome at post-transcriptional level, binds proteins and DNA, involved in regulation of many processes including exocytosis, vesicle transport, Ras/MAPK signaling, and rapamycin-sensitive signaling|Bmh1p; protein coding
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| CTR9 |
CDP1YOL145C |
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Component of the Paf1p complex, which is a large complex that binds to and modulates the activity of RNA polymerase II and is required for expression of a subset of genes, including cyclin genes; contains TPR repeats|Ctr9p; protein coding
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| WHI2 |
YOR043W |
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Protein required, with binding partner Psr1p, for full activation of the general stress response, possibly through Msn2p dephosphorylation; regulates growth during the diauxic shift; negative regulator of G1 cyclin expression|Whi2p; protein coding
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| LGE1 |
YPL055C |
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Lge1p|Protein of unknown function; null mutant forms abnormally large cells; protein coding
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| ISW2 |
YOR304W |
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Isw2p|Member of the imitation-switch (ISWI) class of ATP-dependent chromatin remodeling complexes; ATPase component that, with Itc1p, forms a complex required for repression of a-specific genes, INO1, and early meiotic genes during mitotic growth; protein coding
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| SET7 |
RMS1YDR257C |
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Nuclear protein that contains a SET-domain, which have been shown to mediate methyltransferase activity in other proteins|Set7p; protein coding
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| IRA2 |
CCS1GLC4YOL081W |
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GTPase-activating protein that negatively regulates RAS by converting it from the GTP- to the GDP-bound inactive form, required for reducing cAMP levels under nutrient limiting conditions, has similarity to Ira1p and human neurofibromin|Ira2p; protein coding
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| RTT107 |
ESC4YHR154W |
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Protein implicated in Mms22-dependent DNA repair during S phase, DNA damage induces phosphorylation by Mec1p at one or more SQ/TQ motifs; interacts with Mms22p and Slx4p; has four BRCT domains; has a role in regulation of Ty1 transposition|Rtt107p; protein coding
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| KEX2 |
QDS1SRB1VMA45YNL238W |
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Kex2p|Subtilisin-like protease (proprotein convertase), a calcium-dependent serine protease involved in the activation of proproteins of the secretory pathway; protein coding
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| CLB1 |
SCB1YGR108W |
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B-type cyclin involved in cell cycle progression; activates Cdc28p to promote the transition from G2 to M phase; accumulates during G2 and M, then targeted via a destruction box motif for ubiquitin-mediated degradation by the proteasome|Clb1p; protein coding
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| RPA34 |
YJL148W |
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RNA polymerase I subunit A34.5|Rpa34p; protein coding
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| ESC8 |
YOL017W |
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Esc8p|Protein involved in telomeric and mating-type locus silencing, interacts with Sir2p and also interacts with the Gal11p, which is a component of the RNA pol II mediator complex; protein coding
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| YNG2 |
EAF4NBN1YHR090C |
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Subunit of the NuA4 histone acetyltransferase complex that acetylates histone H4 and H2A; has similarity to the human tumor suppressor ING1|Yng2p; protein coding
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| SSN8 |
GIG3NUT9RYE2YNL025C |
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Cyclin-like component of the RNA polymerase II holoenzyme, involved in phosphorylation of the RNA polymerase II C-terminal domain; involved in glucose repression and telomere maintenance|Ssn8p; protein coding
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| RAD53 |
LSD1MEC2SPK1YPL153C |
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Protein kinase, required for cell-cycle arrest in response to DNA damage; activated by trans autophosphorylation when interacting with hyperphosphorylated Rad9p; also interacts with ARS1 and plays a role in initiation of DNA replication|Rad53p; protein coding
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| KAR9 |
YPL269W |
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Kar9p|Karyogamy protein required for correct positioning of the mitotic spindle and for orienting cytoplasmic microtubules, localizes at the shmoo tip in mating cells and at the tip of the growing bud in small-budded cells through anaphase; protein coding
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| GCN20 |
YFR009W |
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Gcn20p|Positive regulator of the Gcn2p kinase activity, forms a complex with Gcn1p; proposed to stimulate Gcn2p activation by an uncharged tRNA; protein coding
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| HFI1 |
ADA1SRM12SUP110YPL254W |
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Adaptor protein required for structural integrity of the SAGA complex, a histone acetyltransferase-coactivator complex that is involved in global regulation of gene expression through acetylation and transcription functions|Hfi1p; protein coding
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| RAD61 |
YDR014W |
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Protein of unknown function; mutation confers radiation sensitivity|Rad61p; protein coding
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| MEC1 |
ESR1SAD3YBR136W |
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Genome integrity checkpoint protein and PI kinase superfamily member; signal transducer required for cell cycle arrest and transcriptional responses prompted by damaged or unreplicated DNA; monitors and participates in meiotic recombination|Mec1p; protein coding
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| ACS2 |
YLR153C |
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Acetyl-coA synthetase isoform which, along with Acs1p, is the nuclear source of acetyl-coA for histone acetylation; mutants affect global transcription; required for growth on glucose; expressed under anaerobic conditions|Acs2p; protein coding
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| SWC4 |
EAF2GOD1YGR002C |
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Component of the Swr1p complex that incorporates Htz1p into chromatin; component of the NuA4 histone acetyltransferase complex|Swc4p; protein coding
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| SDC1 |
CPS25SAF19YDR469W |
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Sdc1p|Subunit of the COMPASS (Set1C) complex, which methylates histone H3 on lysine 4 and is required in transcriptional silencing near telomeres; has similarity to C. elegans Dpy-30; protein coding
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| ESA1 |
TAS1YOR244W |
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Esa1p|Histone acetyltransferase catalytic subunit of the native multisubunit complex (NuA4) that acetylates four conserved internal lysines of histone H4 N-terminal tail; required for cell cycle progression; protein coding
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| EPL1 |
YFL024C |
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Component of NuA4, which is an essential histone H4/H2A acetyltransferase complex; homologous to Drosophila Enhancer of Polycomb|Epl1p; protein coding
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| VID21 |
EAF1YDR359C |
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Component of the NuA4 histone acetyltransferase complex|Eaf1p; protein coding
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| UFD4 |
YKL010C |
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Ubiquitin-protein ligase (E3) that interacts with Rpt4p and Rpt6p, two subunits of the 19S particle of the 26S proteasome; cytoplasmic E3 involved in the degradation of ubiquitin fusion proteins|Ufd4p; protein coding
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| TOF2 |
YKR010C |
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Nonessential mitochondrial protein of unknown function with sequence similarity to Net1p; identified as a topoisomerase I (Top1p) binding protein; displays synthetic genetic interactions with TOP1 and HPR1|Tof2p; protein coding
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| UBC13 |
YDR092W |
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Ubc13p|Ubiquitin-conjugating enzyme involved in the error-free DNA postreplication repair pathway; interacts with Mms2p to assemble ubiquitin chains at the Ub Lys-63 residue; DNA damage triggers redistribution from the cytoplasm to the nucleus; protein coding
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| MMR1 |
YLR190W |
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Mmr1p|Phosphorylated protein of the mitochondrial outer membrane, localizes only to mitochondria of the bud; interacts with Myo2p to mediate mitochondrial distribution to buds; mRNA is targeted to the bud via the transport system involving She2p; protein coding
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| MDM39 |
GET1YGL020C |
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Get1p|Subunit of the GET complex; required for the retrieval of HDEL proteins from the Golgi to the ER in an ERD2 dependent fashion and for normal mitochondrial morphology and inheritance; protein coding
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| UBP2 |
YOR124C |
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Ubiquitin-specific protease that removes ubiquitin from ubiquitinated proteins, cleaves at the C terminus of ubiquitin fusions; capable of cleaving polyubiquitin and possesses isopeptidase activity|Ubp2p; protein coding
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| YGR071C |
YGR071C |
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Putative protein of unknown function; deletion mutant has increased glycogen accumulation; green fluorescent protein (GFP)-fusion protein localizes to the nucleus|Ygr071cp; protein coding
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| SEC22 |
SLY2TSL26YLR268W |
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R-SNARE protein; assembles into SNARE complex with Bet1p, Bos1p and Sed5p; cycles between the ER and Golgi complex; involved in anterograde and retrograde transport between the ER and Golgi; synaptobrevin homolog|Sec22p; protein coding
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| RDH54 |
TID1YBR073W |
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DNA-dependent ATPase, stimulates strand exchange by modifying the topology of double-stranded DNA; involved in recombinational repair of DNA double-strand breaks during mitosis and meiosis; proposed to be involved in crossover interference|Rdh54p; protein coding
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| YMR003W |
YMR003W |
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Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the mitochondria; YMR003W is not an essential gene|Ymr003wp; protein coding
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| APC9 |
YLR102C |
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Apc9p|Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C), which is a ubiquitin-protein ligase required for degradation of anaphase inhibitors, including mitotic cyclins, during the metaphase/anaphase transition; protein coding
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| UBC4 |
YBR082C |
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Ubc4p|Ubiquitin-conjugating enzyme (E2), mediates degradation of short-lived and abnormal proteins; interacts with E3-CaM in ubiquitinating calmodulin; interacts with many SCF ubiquitin protein ligases; component of the cellular stress response; protein coding
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| PDA1 |
YER178W |
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E1 alpha subunit of the pyruvate dehydrogenase (PDH) complex, catalyzes the direct oxidative decarboxylation of pyruvate to acetyl-CoA; phosphorylated; regulated by glucose|Pda1p; protein coding
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| RAD5 |
REV2SNM2YLR032W |
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Rad5p|Single-stranded DNA-dependent ATPase, involved in postreplication repair; contains RING finger domain; protein coding
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| SIC1 |
SDB25YLR079W |
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Inhibitor of Cdc28-Clb kinase complexes that controls G1/S phase transition, preventing premature S phase and ensuring genomic integrity; phosphorylation targets Sic1p for SCF(CDC4)-dependent turnover; functional homolog of mammalian Kip1|Sic1p; protein coding
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| YKU80 |
HDF2YMR106C |
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Subunit of the telomeric Ku complex (Yku70p-Yku80p), involved in telomere length maintenance, structure and telomere position effect; relocates to sites of double-strand cleavage to promote nonhomologous end joining during DSB repair|Yku80p; protein coding
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| RIS1 |
DIS1YOR191W |
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Member of the SWI/SNF family of DNA-dependent ATPases, plays a role in antagonizing silencing during mating-type switching, contains an N-terminal domain that interacts with Sir4p and a C-terminal SNF2 domain|Ris1p; protein coding
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| SWC3 |
SWC1YAL011W |
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Protein of unknown function, component of the SWR1 complex, which exchanges histone variant H2AZ (Htz1p) for chromatin-bound histone H2A; required for formation of nuclear-associated array of smooth endoplasmic reticulum known as karmellae|Swc3p; protein coding
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| MRC1 |
YCL060CYCL061C |
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Mrc1p|S-phase checkpoint protein found at replication forks, required for DNA replication; also required for Rad53p activation during DNA replication stress, where it forms a replication-pausing complex with Tof1p and is phosphorylated by Mec1p; protein coding
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| SAP30 |
YMR263W |
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Sap30p|Subunit of a histone deacetylase complex, along with Rpd3p and Sin3p, that is involved in silencing at telomeres, rDNA, and silent mating-type loci; involved in telomere maintenance; protein coding
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| UBP6 |
YFR010W |
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Ubiquitin-specific protease situated in the base subcomplex of the 26S proteasome, releases free ubiquitin from branched polyubiquitin chains; deletion causes hypersensitivity to cycloheximide and other toxic compounds|Ubp6p; protein coding
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| LSM1 |
SPB8YJL124C |
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Lsm (Like Sm) protein; forms heteroheptameric complex (with Lsm2p, Lsm3p, Lsm4p, Lsm5p, Lsm6p, and Lsm7p) involved in degradation of cytoplasmic mRNAs|Lsm1p; protein coding
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| SLX4 |
YLR135W |
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Slx4p|Subunit of a complex, with Slx1p, that hydrolyzes 5' branches from duplex DNA in response to stalled or converging replication forks; function overlaps with that of Sgs1p-Top3p; protein coding
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| VPS64 |
FAR9YDR200C |
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Cytoplasmic protein required for cytoplasm to vacuole targeting of proteins; forms a complex with Far3p, Far7p, Far10p, and Far11p that is involved in pheromone-induced cell cycle arrest; also localized to the endoplasmic reticulum membrane|Vps64p; protein coding
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| RCO1 |
YMR075W |
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Essential subunit of the histone deacetylase Rpd3S complex; interacts with Eaf3p|Rco1p; protein coding
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| MNN10 |
BED1REC41SLC2YDR245W |
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Mnn10p|Subunit of a Golgi mannosyltransferase complex also containing Anp1p, Mnn9p, Mnn11p, and Hoc1p that mediates elongation of the polysaccharide mannan backbone; membrane protein of the mannosyltransferase family; protein codi |